Spectral-dynamic representation of DNA sequences
نویسندگان
چکیده
منابع مشابه
3D-dynamic representation of DNA sequences
A new 3D graphical representation of DNA sequences is introduced. This representation is called 3D-dynamic representation. It is a generalization of the 2D-dynamic dynamic representation. The sequences are represented by sets of "material points" in the 3D space. The resulting 3D-dynamic graphs are treated as rigid bodies. The descriptors characterizing the graphs are analogous to the ones used...
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I11 t.his article, the spectral ailalysis of cat,egorical time series is applied t,o t,he st.udy of DNA sequences. By ineails of t,lle st,udy of the spectral eilvelope for a ho~nologous DNA seglneilt from five different, pri1nat.e species, some global crit,eria are proposed to measure their similarity: and some iilforinat,ion concerning t,heir evolut,ioilary origin is obt,ained.
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We present new numerical characterization of DNA sequences that is based on the modified graphical representation proposed by Hamori. While Hamori embeds the sequence into Euclidean space, we use analogous embedding into the strong product of graphs, 4 n K P , with weighted edges. Based on this representation, a novel numerical characterization was proposed in [14] which is based on the product...
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We present new numerical characterization of DNA sequences that is based on the modified graphical representation proposed by Hamori. While Hamori embeds the sequence into Euclidean space, we use analogous embedding into the strong product of graphs, K4 ×Pn, with weighted edges. Based on this representation, a novel numerical characterization was proposed in [Pesek and Žerovnik, MATCH Commun. M...
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ژورنال
عنوان ژورنال: Journal of Biomedical Informatics
سال: 2017
ISSN: 1532-0464
DOI: 10.1016/j.jbi.2017.06.001